BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025C09SP1|AL428359
(862 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig571 1685 0.0
>3x_Contig571
Length = 1771
Score = 1685 bits (850), Expect = 0.0
Identities = 860/862 (99%), Gaps = 1/862 (0%)
Strand = Plus / Plus
Query: 1 ataccaatcgattgctgtgagagtgtaaatattaaagctggtgtactgaaaatgccggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 ataccaatcgattgctgtgagagtgtaaatattaaagctggtgtactgaaaatgccggtt 965
Query: 61 cctataattctgttaacaatcaatgaaatagtgtgaaaggtgttaagtttatgctcatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966 cctataattctgttaacaatcaatgaaatagtgtgaaaggtgttaagtttatgctcatgg 1025
Query: 121 ggattaataatgtaatcttcactaatgagaaataggtcttggatcggttcatctgtgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 ggattaataatgtaatcttcactaatgagaaataggtcttggatcggttcatctgtgctt 1085
Query: 181 gctatctctcgacgatcttcgttcggagatgacattgtagccccttattgccaagatgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 gctatctctcgacgatcttcgttcggagatgacattgtagccccttattgccaagatgat 1145
Query: 241 atctaatactataaggggaacctctaaaaacatccaagacacgtaaggttacgtgtcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 atctaatactataaggggaacctctaaaaacatccaagacacgtaaggttacgtgtcaaa 1205
Query: 301 ggcccattatcaggttcatcttaactcatttattgatcaaggttcataatgcagcttcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 ggcccattatcaggttcatcttaactcatttattgatcaaggttcataatgcagcttcta 1265
Query: 361 taatcttcttccatttcatgaagtcaaacaatatcacgtgctaaaatcacatatgccaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1266 taatcttcttccatttcatgaagtcaaacaatatcacgtgctaaaatcacatatgccaat 1325
Query: 421 aattaaggaaggctatcccagagacaccataagataccagaatatattcaaattagtctg 480
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 aattaaggaaggatatcccagagacaccataagataccagaatatattcaaattagtctg 1385
Query: 481 caacaggtggtgacgaacctgcggcgttatgcaatcgtaactctattgaatttatgtcag 540
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1386 caacaggtggtgacgaa-ctgcggcgttatgcaatcgtaactctattgaatttatgtcag 1444
Query: 541 ttcatagtttttctattccaagggcataaccatcagcataaattattttgatagaaatag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1445 ttcatagtttttctattccaagggcataaccatcagcataaattattttgatagaaatag 1504
Query: 601 ctttacctgaaccttcttgagccaagtaaaggcaagagtgaagataaggggttcacagat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1505 ctttacctgaaccttcttgagccaagtaaaggcaagagtgaagataaggggttcacagat 1564
Query: 661 aatgagaggttagtgtccaataaccggatagaatgatgagccagaaaagttttcaagtgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1565 aatgagaggttagtgtccaataaccggatagaatgatgagccagaaaagttttcaagtgg 1624
Query: 721 tcgacacgacgaggttggaacagcttcttgatgatgatcggttcaggttgaatttacaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1625 tcgacacgacgaggttggaacagcttcttgatgatgatcggttcaggttgaatttacaac 1684
Query: 781 ctgttgatatagagaaagagcatgcgcaagaatgcttagatctctatgtaaaaggtgacc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1685 ctgttgatatagagaaagagcatgcgcaagaatgcttagatctctatgtaaaaggtgacc 1744
Query: 841 ttaaggaatgtctcgaactgat 862
||||||||||||||||||||||
Sbjct: 1745 ttaaggaatgtctcgaactgat 1766
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6201
Number of Sequences: 1807
Number of extensions: 6201
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 862
length of database: 10,358,551
effective HSP length: 16
effective length of query: 846
effective length of database: 10,329,639
effective search space: 8738874594
effective search space used: 8738874594
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)